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Thanks for your inquiry. Most likely, you use Aspose.Words in evaluation mode and document is truncated. There is evaluation limitation of maximum number of paragraphs in the document. You should see the following text in the output documents.
This document was truncated here because it was created using Aspose.Words in Evaluation Mode.
That is why you see only part of all bookmarks in the document.
If you want to test Aspose.Words without the evaluation version limitations, you can request a 30-day Temporary License. Please refer to
If you already have the license, please make sure you applied it correctly as described here:
If this does not help, please attach your document here for testing.